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Comparative genomics of pyrophilous fungi reveals a link between fire events and developmental genes
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Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi.
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Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses
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Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi.
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Uncovering Novel Genomes from Earth’s Microbiomes
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge …
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Biology of Fungi and Their Bacterial Endosymbionts
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Lignin deconstruction by anaerobic fungi
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Biotechnological Innovations through Fungi
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JGI Launches Latest Strategic Plan
… has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … and incubation process. “JGI’s ‘vision’ is truly a tour de force,” said Mary Maxon, Biosciences Associate …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …
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Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits
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JGI Announces 2025 New Investigator Portfolio
Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for … The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … will investigate a diverse array of projects, including the genomic dynamics of biofuel-producing fungi, the effects of …
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