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Serendipita Fungi Modulate the Switchgrass Root Transcriptome to Circumvent Host Defenses and Establish a Symbiotic Relationship.
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Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata … The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural changes in …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, … 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as well as target academic, governmental … works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a … diversity beyond a single reference genome, which is key to understanding its full evolutionary history. Through … and innovation program (grant agreement no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) to …
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Genomic evidence for the degradation of terrestrial organic matter by pelagic Arctic Ocean Chloroflexi bacteria
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing
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Distribution and abundance of tetraether lipid cyclization genes in terrestrial hot springs reflect pH
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … United States. They also provided multiple access points to the information. The team harnessed a community-science … land use or water quality changes. Summary Rivers are key components of watershed ecosystems, where rain or snow …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … probing is a long and laborious process — as well as a key way scientists study microorganisms. Because …
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