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Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis
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User Support Analysis Group
Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of first, including the flagship internship program between Alabama Agricultural & Mechanical University and the … success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific …
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Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge … and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and …
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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Ectomycorrhizal fungi enhance pine growth by stimulating iron‐dependent mechanisms with trade‐offs in symbiotic performance
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An Improved Method of RNA Isolation from Loblolly Pine (P. taeda L.) and Other Conifer Species
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Marine Microbe Contains Multitudes
… species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metatranscriptomes and single cell genomes, Boeuf — then a postdoctoral associate in Ed DeLong’s group at the …
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“A STEM career is in reach and accessible”
Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with personal, academic and professional development … higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … archaea, fungi, viruses — to support scientists around the world. Most of those researchers send their samples in from … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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