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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … with a proposal from UT-Austin’s Tom Juenger, a longtime JGI collaborator and a senior author on this study. The use … data collection,” he added. Jeremy Schmutz , head of the  JGI Plant Program , drew parallels between these  common …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … hosts,” noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 …
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Pinning Down a Piece of Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … said Crysten Blaby-Haas, a research scientist at the JGI and Molecular Foundry, and the study’s senior author. In … these lines came from UC Berkeley professor and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  Brachypodium  grasses have … a Pan-genomic Context For the study, partly enabled by the JGI’s  Community Science Program , the team generated …
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Green Algae Reveal One mRNA Encodes Many Proteins
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  … The U.S. Department of Energy Joint Genome … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite … bacterial and archaeal sequences. Kyrpides heads the JGI’s Microbiome Data Science group, and Ivanova leads the …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s … a video about the Biotech Partner summer interns at the JGI. What did you do for your summer vacation? …
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Gut Fungi: Unexpected Source of Novel Chemicals
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory. The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating … the fungi were making. So, Trent Northen , head of the JGI Metabolomics Technology Group, with scientists Ben Bowen …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … their RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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