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Finding the Fermenters
… 8,300 organisms from multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of …
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Synthesis
… assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate … DNA constructs:  Individually arrayed constructs, up to ~150 Kb in length  Pooled libraries such as sgRNA, promoter … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software …
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Viral Genomics Group
Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction … uncultivated phages.  Current Opinion in Virology .  49 , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions — …
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Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Creating an Energy Market for Miscanthus
… policy and Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding …
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Tina Clarke
Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in …
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JGIota: The Algae Nicknamed ‘Chlamy’
This shorter episode is about a tiny, single-celled alga – Chlamydomonas …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
And EcoFABs also work well in the classroom. This episode, we visit Los Medanos Community College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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How to Target a Microbial Needle within a Community Haystack
Marine Microbiology worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … cells that give off a much brighter signal. Cells from many natural environments are typically too dim to see by flow … User Facility, is supported under Contract No. DE-AC02-05CH11231. This study was funded by the Max Planck Society. …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re the … them tantalizing plants to harness for bioenergy. In this episode, hear from Oak Ridge National Laboratory scientists …
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Gotta Catch 'Em Gall
… to raise their young in structures called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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