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Gut Fungi: Unexpected Source of Novel Chemicals
… complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic … fungi branched off early from aerobic fungi, which can breathe oxygen — just like we do. Oxygen is a rich source of … was to try to identify what natural products the fungi were making. So, Trent Northen , head of the JGI Metabolomics …
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Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will … in tracing the genetic signature of the organism back to commercial nursery plants in Europe, when seemingly …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of … in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine … predictive models on how climate change may impact marine microbes and by extension, the ocean’s capacity to act as a …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science … but they’re not always immediately apparent. Similarly, the microbes found in plant roots may have unknown roles. Some …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … in many impactful papers in recent years, but are also looking forward to jointly expanding into new areas of …
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A Grass Model to Help Improve Giant Miscanthus
… chromosomes of  Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year (perenniality). The Impact … The reference genome for  M. sinensis,  and the associated genomic tools, allows  Miscanthus to both inform and …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … years after the JGI united the genomics expertise of three national labs in one long building at Walnut Creek, after … , two of the JGI’s sequencing platforms were turned back on. A third sequencing platform was scheduled to resume …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism … abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the chemicals …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows … or genome, which underlies physical features and functions. Making connections between the structures and functions of …
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