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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of … In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries … of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community of postdoctoral and …
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Learning to Look
As described July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … discover new anti-CRISPRs,” said Adair Borges, a graduate student in bacterial immunologist Joe Bondy-Denomy’s lab at …
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Examples: Successful LOIs & Submissions
… communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional … Genomics Submission … FICUS Example #1 … FICUS Example #2 …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … rapid activation of secondary metabolite biosynthetic gene clusters in bacteria, Cell Chemical Biology , 2022 … R&D100 …
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Partners
The JGI leverages its existing partnerships and develops others … advance the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha … and RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles … analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users … with  Science Programs and  Operations enable the JGI to focus on expanding molecular capabilities and …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five fungal species to answer questions …
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Evolution of a Fungal Gene Expression Regulator
… their genomes, but is not well understood in fungi. A team of researchers reported on the largest analysis of 5mC … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … in repetitive DNA and transposons in methylated cytosine clusters (MCCs – similar to the MAC clusters for 6mA), …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, reached this milestone with a recent publication in … about what it means to be a scientist. “To see how team science is done at an advanced and large research …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … this work sets up protocols and pipelines that other teams can use around the world. These tools give researchers … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the …
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