The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids
Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Complete Genome Sequence of Cupriavidus basilensis 4G11, Isolated from the Oak Ridge Field Research Center Site
Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
DOE JGI Metagenome Workflow
Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
JGI Portals
Molecular characterization of L-413C, a P2-related plague diagnostic bacteriophage
