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Year in Review: JGI’s 2018 Progress Report Available Now
… National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been used …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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A Grass Model to Help Improve Giant Miscanthus
… the associated genomic tools, allows Miscanthus to both inform and benefit from breeding programs of related candidate … the fall the plants store nitrogen in its rhizomes – in the form of the nitrogen-rich amino acid asparagine – and …
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Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4
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JGI@25: From Life at the Extremes to Editing Genomes
… interest. As Doudna noted in her book, “These bits of information sent a little shiver of intrigue down my spine; if …
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The Power of One, Amplified
… recent years, advances in sequencing technologies and bioinformatic tools have helped decode the genomes of tens of … metagenomics. Such techniques take advantage of bioinformatics tools for  extracting snippets of microbial … cell approaches have been typically used as a complement to isolate sequencing, i.e. when the targeted cells cannot be …
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Supporting Global Research into Actinomycetes
… and therefore a cornerstone of ActinoBase,  a public platform built on the knowledge of researchers studying … Otani, an author on the paper and contributor to the platform. Otani is also a scientist at the U.S. Department of … its  Secondary Metabolite Collaboratory, currently in beta form as the group seeks early feedback. The SMC web platform …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Doubling Down on Known Protein Families
… unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … — that is, they are similar to previously known genes from isolate organisms, but we still aren’t sure of their … doesn’t match any of the previously known genes from isolates, there isn’t much scientists can tell about its …
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A Complex Confection Decoded: Sugarcane Reference Genome
… sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve sugarcane … including some duplicates, to sort through in order to form a single cohesive image. An approximately nine billion … shows the genomic effects of breeding practices that transformed sugarcane into production factories for sugar and …
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An Earth Month Look at Sustainability Efforts at the JGI
… these are emissions that were made in creating goods and performing services,” Fulton said. These emissions come from … garden outside the building. In fact, they’ve recently formed an offshoot of the Zero Waste Initiative, Sustainable … more about the Sustainable Garden Club at LBNL? Submit this form  ( https://bit.ly/LBL-SustainableGardenClub-Signup ) to …
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