Search

… serves as the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, …

… practices, development of standards and processes for data quality and sharing, and data workflows and management best … He was one of the eight JGI researchers on the 2023 Highly Cited Researchers list, and has appeared on the list …

… of developing alternative fuels from plants is the high cost and resource requirements of processing these … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … You can learn more about how JGI data supports higher education in this JGIota , a Genome Insider podcast …

… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … in East Antarctica and enriched for native microbes. Metagenomes from enrichment cultures were sequenced and … by the JGI. Transmission electron microscopy (TEM) provided high resolution images confirming the  Hrr. lacusprofundi  …

Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. … National Park. This large geothermal pool contains high levels of sulfur, methane, carbon dioxide and hydrogen. … State University, commented that “Washburn Hot Springs is a highly-reduced, suboxic system that may be analogous to …

… are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … tool Roux and his colleagues developed first worked on a reference dataset that included genome sequences known to be … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially … are in their biomass, because that affects the quality of the food of these invertebrates that we use as … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …

… the data and work with the data. Q: How would you include a reference or citation in a proposal? A: If you’re presenting … or if you want to give some background of the field, references would be encouraged. And you can either put those … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

… virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the … sequence data) can suggest different predatory behaviors. A high relative abundance of virus can suggest a so-called “Kill the Winner” strategy: a virus infects a highly abundant host (a “winner,” in terms of numbers), …

… to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new high-confidence host predictions across a variety of …