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DAS Tool for Genome Reconstruction from Metagenomes
… to understanding how these microbes respond and adapt to environmental changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … technology and expertise in order to address pressing energy and environmental scientific challenges. In Nature …
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A Collaboration to Improve Plant Genome Annotations Across Species
… to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, a national user … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … aimed specifically at “Gene function” and “Functional genomics.” We will keep updating the Gene Atlas with curated …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the network of …
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Forming Scientific Connections and Building Community
… their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … from stop to stop and having responsibilities. I like the environment that JGI brings and being able to be a part of … a JGI intern means being a part of a dynamic and innovative environment where collaboration and research discovery are …
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Doubling Down on Known Protein Families
… was led by a team of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … capable of doing a lot of unique things when it comes to energy cycles — turning biomass into things like ethanol or … these families. They divided the protein families up by environment and found only 7% of protein families were …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Computing Project , the JGI — along with the National Energy Research Scientific Computing Center, Oak Ridge … that pays dividends. Microbes are at the core of many environmental processes, and their genetic makeup forms the basis of their behavior in the environment. Large metagenomic surveys could lead to better …
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Nikos Kyrpides
… microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpenes play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically … species number among the eucalypts, they inhabit different environments. Eucalyptus species prefer cooler, more … in nature. As part of a proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing …
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Pangenomics reveals alternative environmental lifestyles among chlamydiae
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An environmental bacterial taxon with a large and distinct metabolic repertoire
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Environmental predictors of electroactive bacterioplankton in small boreal lakes
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… live in our immediate microbiome. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), … by the Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. Dr. Charles Gawad has been …
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