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… addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a … “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using … used CRAGE to engineer domesticated bacterial strains with novel biosynthetic gene clusters (BGCs). BGCs make diverse …

Program. His responsibilities include the development of novel computational tools to identify virus sequences, the … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. …

For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for …

… relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying … portion of the Arkansas River that’s just a little west of Fort Collins, near a city called Leadville. ED:   And, uh, …

High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … successfully automated aspects of a commonly-used process for studying microbial communities, with results published … with potential applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular …

For the first time in several years, the DOE Joint Genome … UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … Roux and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and …

Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … acetoclastic. All three pathways require the gene cluster for methane production known as Mcr. Until recently, the Mcr …

… circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from … find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …

… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based … genetic backgrounds, and that these 8X populations contain novel combinations of genetic diversity. We also found that …

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Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest piece, JGI … the biochemical processes taking place during the lignocellulose decomposition by the black morel, as well as the …