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Tracing the Evolution of Shiitake Mushrooms
… of Lentinula species.The Lentinula genus diverged roughly 28 million years ago, when the largest mammal ever, Paraceratherium, … This research was supported by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy …
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Mapping Heat Resistance in Yeasts
… annotation to harness the genomic data. Reported October 8, 2018, in Nature Genetics , a team led by researchers at the … between species that have been separated for millions of years. The study highlights the genes that could be used to …
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A Model System for Perennial Grasses
… genomes from varieties that diverged over a million years ago. The hallii variety thrives in desert … var. hallii (99.2% complete) and P. hallii var. filipes (94.8% complete) and resequenced a host of natural collections … This work was funded by NSF/IOS-1402393 (JTL), NSF/IOS-1639872 (JTL/TEJ), NSF/IOS-0922457 (TEJ), NSF/IOS-1444533 (TEJ), …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… that adapted to marine environments hundreds of millions of years ago.  The Impact Chloroflexota are bacteria that act … The work (proposal:  https://doi.org/10.46936/10.25585/60000691 , and  https://doi.org/10.46936/10.25585/60007554 ) conducted by the U.S. Department of Energy …
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Ancient Algae Reveal Secrets of Plant Evolution
… that helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ … the United States Department of Agriculture (USDA) award (58-8042-9–089), the National Institutes of Health (NIH) awards …
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When “The Blob” Made It Hotter Under the Water
… United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures by a few …
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Statement on the Use of Genomics Data
… the publication date, whichever comes first. For nearly 40 years, the International Nucleotide Sequence Database …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of …
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JGI@25: From Life at the Extremes to Editing Genomes
… other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science … has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated proteins … 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Harrington LB et al. Programmed DNA destruction by …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the …
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JGI@25: Using Team Science to Build Communities Around Data
… The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. … collaborators and co-authors with affiliations at over 180 organizations in 29 U.S. states and 35 countries. Of the … has “significantly advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic …
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Marine Microbe Contains Multitudes
… cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … was supported by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore Foundation …
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