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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… proposals come from 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the … who work with more than 10,000 undergraduate students each year. Brian Looney of Duke University is interested in …
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JGIota: Looking Back at Sequencing for Soybeans
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … data obtained from environmental samples — to identify over 27,000 microbial genes. These genes were identified … those genes were actually tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is … (all times in PST unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in … Tips for Submitting Successful Proposals December 9  4:15pm PT (online) Town Hall on how the Facilities Integrating …
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Training the Next Generation of Talent
… of California, Merced to start orientation as a first-year graduate student in the Quantitative Systems Biology … I’ll take that knowledge back with me.” Now a second-year evolutionary biology student in David Ardell’s lab, he … that’s going to be generated at academic level in a few years as it’s getting closer to producing trillion base data …
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JGIota: Looking Back at Methane-Making Microbes
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the … a variety of methane-mitigation goals. One aim is identifying chemical compounds that could inhibit microbial …
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VEGA Symposium
… rates available now General & Berkeley Lab Attendee – $250 Students & Postdocs – $200 Regular Rates (begin September … & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral … 18-19, 2026 on the UC Berkeley campus. Organized every two years since 2018, the goal of this symposium is to bring …
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Marine Microbe Contains Multitudes
… to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 … cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: Fy-TOFF-thor-uh ra-MOR-um) the genus in Latin translates to … disease and how to control them. Despite advances in the years since this landmark publication, SOD continued to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to analyze samples from one experiment. Starting a  few years ago, researchers can request quantitative SIP analysis … and Reusability) for data reuse.  In the last year, JGI’s user community has helped propel multiple … of his lab, Abigayle Simpson. They found that although 20 years of SIP experiments have generated plenty of insights, …
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