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… how scientists Aindrila Mukhopadhyay and Steve Singer are harnessing the versatile bacterium Pseudomonas putida to …

… within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have taken a look at … the JGI has previously sequenced , and provides a powerful snapshot of what soils across different burn severities look …

… not well understood — scientists can better fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more efficiently. Summary To interrogate the close partnership of … how to optimize characteristics like growth rate. Harnessing that power could help usher widespread use of …

… information that they believe will lend insights into discussions on the origin of archaea. They report that the … were performed on the Hyalite High-Performance Computing System, operated and supported by MSU’s Information …

… and participation — is especially important in microbial ecosystems. These communities harbor tens of thousands of … microbes cycle nitrogen and carbon, or how freshwater ecosystems process methane and organic matter.  However, to get … Especially as machine learning and AI promise new ways of harnessing large datasets, JGI researchers and users are …

… (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are … applications in a range of fields including agriculture, ecosystem health, and medicine optimization.  Through the … developmental support from KBase (The Department of Energy Systems Biology Knowledgebase). Myco-Ed is supported by the …

… Summary Images of giant miscanthus often appear in discussions of rapidly growing plants whose biomass can be … without requiring replanting. Miscanthus is especially efficient at this process thanks to a specialized kind of … to and from the rhizome and contribute to the grass’ efficient perennial life cycle. For example, in the fall the …

… Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the past decade and shared favorite memories in a panel discussion.  Suzanne Sindi , a program cofounder and Applied … and a teaching assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …

… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological …