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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … Community Science Program, and how you can use the KBase system to accelerate your plant genomics research. Click … sequence information to BER-funded activities of plant systems that make use of these resources will present on …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science Graduate … Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on wetland … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Tanja Woyke Elected to American Academy of Microbiology
Genomics Department Head for the Environmental Genomics and Systems Biology Division of the Lab’s Biosciences Area since … Lab honorees. Woyke’s research focuses on developing and harnessing single-cell methods to access the genetic …
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What Happens Underground Influences Global Nutrient Cycles
Focus Area (SFA), supported by the Terrestrial Ecosystem Science (TES) program within the DOE Office of …  under PNNL’s Soil Microbiome SFA, which aims for a systems-level understanding of the soil microbiome and its … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of XX. But, like some plant and songbird species, the system in shrub willow is flipped: females are heterogametic. To avoid confusion with the mammalian system, the sex chromosomes are called Z and W instead of X … be shared in common between poplar’s Y — poplar has an XY system — and shrub willow’s W chromosomes. One shared gene …
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New Research Sheds Light on Diversity in the Deep Sea
… survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how … regions to better understand how these hydrothermal ecosystems function in such extreme conditions. They identified … communities, with possible applications in biogeochemical engineering,  biofuel production and more. … This work was …
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Tracking the Origins of Methane-Producing Microbes
… three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); … the complete set of genes needed for hydrogen-dependent and CO2-reducing methanogenesis.  These two things combined led … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Trent Northen
… mass spectrometry approaches and model laboratory ecosystems (EcoFABs). … Trent Northen is the Metabolomics … of focus, major initiatives and more.  … B.S. in Chemical Engineering, University of California Santa Barbara Ph.D. in … G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic Gene …
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Refining the Process of Identifying Algae Biotechnology Candidates
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JGI on the 2021 Highly Cited Researchers List
… information could be useful toward the DOE’s interest in harnessing the crop toward producing sustainable alternative … viruses, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 proposals … letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for …
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An Integrated Dataset to Understand Ecosystem Interaction
… partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  … in  Scientific Data connects molecular features to large ecosystem-level processes for the first time. By collecting … and the role of microbes in mediating these processes. By harnessing the data made available through this …
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