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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new … and water into oxygen and sugars. How photosynthesis works, though, is much harder to pin down.  Photosynthesis … is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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JGI on the 2021 Highly Cited Researchers List
… during the last decade.” Approximately 6,600 researchers working in 21 fields appear on the list, and those from the … biology. The information could be useful toward the DOE’s interest in harnessing the crop toward producing … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … “with unprecedented precision” the gene functional networks and regulatory networks of a single strain of  …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI … Philipp Zerbe of the University of California, Davis. “The work with JGI was one of the first things we actually … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 … Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the … influences the soil microbiome and biochemical reaction networks, and also assessing the role of viruses in the soil …
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Introducing New Members of the JGI User Executive Committee
User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced “you-wren”) of the University of Arizona! They join … [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A … of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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The Expanding Universe of Methane Metabolisms in Archaea
… issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … in the physical sciences in the United States, and is working to address some of the most pressing challenges of …
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Simon Roux
… knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and … et al., 2023. iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … early days as a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the … require the nutrient copper for photosynthesis; Chlamy does not. When the lab reopened, Merchant would go on to …
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JGI User Executive Committee Expands
U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence … cell wall to address dairy sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on …
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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