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Cataloging the Microbes that Manage the Health of River Systems
… level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy and nutrient … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … river microbiome datasets are also available through the DOE Systems Biology Knowledgebase, allowing researchers to …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were … better understand arsenic mobility and to better understand their roles in the global sulfur cycle. Copies are available …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative … on how to partner with the Metagenome Science Program on their research are encouraged to schedule time with Emiley …
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Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment
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Diversity and function of methyl-coenzyme M reductase-encoding archaea in Yellowstone hot springs revealed by metagenomics and mesocosm experiments
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A collection of archaeal 16S rRNA Clone-FISH cultures for probe validation in fluorescence in situ hybridization experiments
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Supporting Global Research into Actinomycetes
… Otani is also a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a … global community of researchers studying actinobacteria to share information and data. The filamentous actinobacteria …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Fungal Friends or Foes in Plant Roots
… roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help … and Environment (INRAE) and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project was funded by the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User …
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Expanding Virophage Diversity
… with giant viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid … Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the …
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds … published a Nature Communications paper that builds off their early collaborations that could help crop breeders and … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly …
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