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… a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial crops such as … when switchgrass (and by extension similar taxa) are faced with pronounced environmental fluctuations. New findings from this line of research combined with past insights will allow the identification of …

… in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with the National Nuclear Security Administration to … involved in repair of DNA damage, and those associated with atherosclerosis and diabetes mellitus. Los Alamos …

… of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, … over the last year: Kerrie Barry and Jeremy Schmutz worked with a community of switchgrass researchers to conduct a …

… the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced genome, and these gardens allow … allowed the research team to associate climate adaptations with switchgrass biology, information that could be useful …

… Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics … to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. Kirschstein … Ware D, Blaby-Haas CE. (2024) Functional diversification within the heme-binding split-barrel family. J Biol Chem  …

… together over 400 proposal collaborators and co-authors with affiliations at over 180 organizations in 29 U.S. … 85 proposal collaborators, 58 had never shared a proposal with each other prior to their involvement with the 1KFG project. Over 1,000 species have been …

… of them archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the … (ETOP). Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single … said study first author Bojk Berghuis. “This provided us with genetic evidence to tie together the evolutionary …

… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … and trees to grow. However, fire changes the microbes within the soil. To get a clearer picture of how burned … a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study sheds …

… began to offer a window into viral existence. Along with highlighting the viruses in a given sample, … and grades their quality based on completeness. Along with expanding the viral diversity that IMG/VR features, … viruses could play a role. “If you want to do anything with a microbiome — you know, target specific microbes or …

… seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, … and functioning of a given microbial community. Scientists with the U.S. Department of Energy Joint Genome Institute, a … metabolisms represented in hydrothermal vent communities, with possible applications in biogeochemical engineering,  …

… Students can apply for internships and work onsite with an experienced researcher who serves as their mentor. … experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at the JGI through three different … Jacobs participated in the SEED Scholars @ LBNL program,  with support from  the SEED program at UC Berkeley. Sally …

… JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of … the 1Tb cap. PacBio metagenomes are currently sequenced without pooling, which yields ~ 180 Gb of data per library. … PI. We currently use the ‘Base Modification Analysis’ tool within PacBio SMRT link, which works well for 6mA and 4mC …