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Emiley Eloe-Fadrosh
… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … She also leads the DOE’s multi-lab National Microbiome Data Collaborative (NMDC). … Emiley Eloe-Fadrosh is the … Wood-Charlson EM, et al. 2020. The National Microbiome Data Collaborative: enabling microbiome science. Rev. …
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CSP Functional Genomics
… for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …
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Natural Prodcast Episode 7: Ben Shen
… so everybody, readers of the library, can come to our databases and look for the specific information they are … the genomics, with the bioinformatics and with the bigger data, another area I see a great potential will be machine … fungal strains, that will generate a massive amount of data that current technology has never encountered in the …
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Enlarging Windows into Understanding Gene Functions
Berkeley National Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription … (cDNA), reducing the amount of time it takes to produce a dataset from months to days and halving the total reagent …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic engineering …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and combining the information with previously published datasets. The work was  recently published in the journal  … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still … Strategic Plan. The present paper provides a foundational data set that is now available through a new  single-cell …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos went on to … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study … the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes …
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Mateus Fiamenghi
… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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Antonio Camargo
… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Krishna Palaniappan
… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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Triggering Morel Fruiting
… . … Morel Mushrooms on MycoCosm Data Portal …
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