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MGM Workshop at Fisabio Summer School 2026
… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the … by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … and respond to changes in the environment. The Impact Dubbed “the” bioenergy tree, poplars are known for their … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.
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IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Integrating Microbial Community Data Into an Ecosystem‐Scale Model to Predict Litter Decomposition in the Face of Climate Change
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Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg
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Sequencing Technologies & Products
… offering of sequencing capabilities and products to our users. This includes scaling the technologies and enabling … The JGI provides users access to cutting-edge cell sorting, DNA …
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Natural Prodcast Episode 19: Bill Fenical
… that I could combine a  training in chemistry with a hobby of putting your head underwater. But thankfully that … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… with excitement and determination as they came onsite. From data carpentry to science communications, their schedules … Stamatis, Porting XML/Python Based Quality Control to Database/Java Based Process in Gold Sandra Hernandez … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein …
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Approved Proposals
… as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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A Grass Model to Help Improve Giant Miscanthus
… genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from … Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), a Department of Energy (DOE) Bioenergy Research … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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