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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … (Berkeley Lab) describes it, JGI researchers have also collaborated to advance computing infrastructure and … such tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon fixation process … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … different applications. The JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been …
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Tracing the Evolution of Shiitake Mushrooms
… sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks the enzymes … Genome and transcriptome sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental …
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A call for standardized classification of metagenome projects
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… The Department of Energy's Computational Science Graduate Fellowship (DOE CSGF) program was developed … growing need for science and technology professionals with advanced computer skills. During the summer of 2016, … Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… book featuring polar bears in winter scenes that came with crayons in various shades of white. To researchers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … This is also the type of synergistic and collaborative community spirit that the JGI advocates for and actively …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) Symposium … Viral EcoGenomics & Applications (VEGA)  … The JGI is represented at conferences year round; find out where our researchers will be presenting next. Go here to learn about upcoming user-focused webinars and workshops …
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Extreme Scale De Novo Metagenome Assembly
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Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota
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Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems … UniProt, exist, are not specific enough for a microbial community like that from a temperate coniferous forest floor … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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