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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … use around the world. These tools give researchers a way to access much more information about fungi in these …
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Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome … earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that [DNA Synthesis Science Head] …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … this vast collection of rumen microbes gave researchers access to a collection of novel enzymes — many of which …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a … so researchers around the world would have better, easier access to these viral genomes. The new database was called …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the …
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MGM Workshop at Fisabio Summer School
Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health … lectures and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial …
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Comparative proteomic profiles of the marine cyanobacterium Trichodesmium erythraeum IMS101 under different nitrogen regimes
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … of notable achievements that showcase our collaborations and capabilities to enable great science that will help …
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