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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … (JBEI), the JGI worked on resequencing several eucalypt genomes to establish the feasibility of genome wide … by the Australian Research Council (grant numbers DP140102552, DP110101621), and an Australian Government …
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JGI announces 2025 Functional Genomics awardees
… crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into …
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Soil virus offers insight into maintaining microorganisms
… to another, which can have a significant impact on the microbial communities within soil. Using metagenomics, … were retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is … three domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down …
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Fishing for Novel Cellulose Degraders
… characteristics. When they tested the screen method on a microbial community from geothermal hot springs, they … microbes. The new technique is another tool for microbial ecologists to learn more about the diversity of … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …
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Jeremy Schmutz
… eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed … of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. He provides … scientific project management for the reference eukaryotic genomes produced by the DOE Joint Genome Institute and the …
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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Frederik Schulz
… user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz … Molecular Microbiology, University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna … Krinos et al. 2024. Time-series metagenomics reveals changing protistan …
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DRAM for distilling microbial metabolism to automate the curation of microbiome function
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Microbial Ecology on Solar Panels in Berkeley, CA, United States
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
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