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… v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to Phytozome v13. … Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … preset for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ …

… Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which … recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …

… cocoa.  But today the plant is under threat due to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha …

… As SIP experiments shed more light on microbial communities than ever before — especially with the … or how freshwater ecosystems process methane and organic matter.  However, to get all of the information that SIP … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required …

… a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … They also provided multiple access points to the information. The team harnessed a community-science program to … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …

… Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … as a model system to study virus-host interactions. Approximately 150 archaeal viruses had been previously identified. …