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Diversity, distribution, and expression of opsin genes in freshwater lakes
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Viromics approaches for the study of viral diversity and ecology in microbiomes
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A toolkit for microbial community editing
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Microbial Ecology in a Changing Climate
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Microbial adaptability in changing environments
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … Podcasts ,  Spotify or wherever you get your podcasts) Microbial ecologist and JGI user Trina McMahon has been … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Sequencing the fungal tree of life
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Genome sequence of the palaeopolyploid soybean
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ClaMS: A Classifier for Metagenomic Sequences
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to produce knock-out …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … family of enzymes is critical to the synthesis and broad diversity of terpenes. Until recently, studies of the TPS … revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. globulus . …
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