Results

Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when … labor between the two groups. Fungi are much more active in degrading plant matter, and bacteria are more active in … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 …
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Targeted single‐cell sequencing
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Introduction: Sequences and consequences
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … is particularly interested in understanding how, when and why microbes decide to produce which metabolites. … BS, … of p-hydroxycinnamate catabolism in a soil Actinobacterium. J. Bacteriol. 196, 4293-4303. Otani, H., Higo, …
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Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop … (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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