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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … basis of their behavior in the environment.  The JGI genome sequences and metabolomes of microbes and microbial …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written … the most efficient at making proteins likely factors into why fungi have been so evolutionary and ecologically … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … fungi, given that the intricate flagellar apparatus is highly unlikely to regain once it is lost. Depending on the … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics … metabolic pathways that could ultimately enable new or more efficient biotechnologies.  Below find a list of the nine …
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JGI-USCCN Strain Sequencing Opportunity
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple … fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …
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Short sequence motifs, overrepresented in mammalian conserved non-coding sequences
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for … yield new tools for pest control. Secondary metabolites are highly regulated in bacteria, making it difficult to …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 …
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Targeted single‐cell sequencing
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