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Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites
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Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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User Executive Committee Charter
… and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community … UEC responsibilities include: Make recommendations to the JGI regarding calls for proposals, including focus … timing, and proposal review process; Make recommendations to the JGI regarding technical capabilities offered, …
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Taking Stock of the Known and Unknown Microbial Space
… decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, … still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … were usually only around 30% complete.  Described in  ISME Communications , a method called Primary Template-Directed … with the JGI. Working together, they found most bacterial genomes from water and soil communities were at …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… of the terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse … partially explains the great variety of terpene products in nature. As part of a proposal by the DOE’s Joint BioEnergy …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… researchers described how the viruses repeatedly attempted to infect and destroy the host archaea – and how the  … yet abundant subsurface organisms was  recently reported in Nature Communications. The work was co-led by Victoria Turzynski in …
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Fungal Friends or Foes in Plant Roots
… boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … (Berkeley Lab). Their findings were described in a recent Nature Communications paper . The work was partly enabled by a JGI … relevant Dikaria”. This work was supported by funds to S.Hac from a European Research Council starting grant …
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Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs
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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Glycoside Hydrolase Activities of Thermophilic Bacterial Consortia Adapted to Switchgrass
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