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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of Biological and …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Partners
… others providing complementary expertise to advance the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive …
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Ian Blaby
… 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … development/data analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead …
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JGI announces final round of 2022 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … — but the experts we were able to work with on this project to ask questions about structure and function,” …
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How Microbes Can Protect Plants in Drier Straits
… proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to drought. …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … More genome copies in switchgrass leads to increased climate …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of …
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