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… JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the DNA found inside … , the JGI’s web portal for fungal genome data.   The Impact This dataset gives researchers a new foundation for …

… array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  researchers … grow and repair themselves or eliminate waste. The Impact The bacteria, archaea and other microorganisms of the … This work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, …

… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long … armed the plant with an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. …

… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, … as well as project data entered by external users. The Impact One of the significant challenges in maximizing … U.S. Department of Energy operated [DE-AC02-05CH11231]; National Energy Research Scientific Computing Center, which is …

… other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact Chloroflexota are bacteria that act like tiny natural … , and  https://doi.org/10.46936/10.25585/60007554 ) conducted by the U.S. Department of Energy Joint Genome …

… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … fungus  Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell … including lignin, cellulose and hemicellulose. The Impact N. crassa is the model organism for filamentous …

… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … in sequencing technologies applied to the effort. The Impact Found on all continents, including Antarctica where it is a major … of Research, and Society for the Study of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to …

… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … Science Interested in the genomes of algae? You now have one place where you can browse the genetic blueprints of … them, and visualize supporting experimental data. The Impact Algae are important organisms. They play key roles in …

… viruses. The Science In the last thirty years, in environments all over the world, scientists have discovered giants among viruses. Now categorized in their own phylum,  … bioinformatics have sped up the study of giant viruses. The Impact In their existence as large, cosmopolitan, and …

… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, … the level of gene expression by the gradations. The Impact Metabolic engineering could lead to sustainable …

… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … can lead to changes in protein structures and functions, but the DNA bases themselves can also be modified. The … life to date, involving more than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have … have transitioned to the symbiotic lifestyle. The Impact The analysis enables researchers to understand how …