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Graduate Students Get Thesis Research Opportunity at the JGI
… (SCGSR) program awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … research at 12 host national laboratories or facilities between 3-12 consecutive months. Their proposed research … technologies to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists …
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Mining Metagenomes for Cas Proteins
… JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science … Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) Joint … makeup predisposes them to, or protects them from, disease. Much of the work on genome editing has focused on the …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, … March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is located in one of those …
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JGI announces final round of 2022 Functional Genomics awardees
… users who need help translating genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics … to enhance understanding of gene and genome function.  Below find a list of the final six researchers accepted for …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an … studying those microbial methane-makers. Eventually, that could help us dial back their emissions, while still …
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High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India
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User Executive Committee Charter
… providing input and advice on JGI policies and practices that affect users and their science including technical … and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community … new capabilities desired, or capabilities that could be discontinued; Provide suggestions for session themes and …
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Defining a Pan-Genome for Antarctic Archaea
… and researchers are interested in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying … involved significant sized pieces.  Interestingly, much of the strain variation appeared related to defense …
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Triggering Morel Fruiting
… part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In … fungi, widely prized as a culinary delicacy, but also because they influence geochemical cycling in forest … supply to the soil. In contrast, isotopic evidence showed that morel mycelium colonizing the lignocellulosic-abundant …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance … to right: Peng Wang, Sravanthi Tejomurthula, Mi Yan, Deanna Beatty)    Vision  Lead AI-driven genomic innovation to … in studies of complex biological and environmental systems. We optimize our service to the community through responsibly …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. … a DOE Office of Science facility, have increased the number of known high quality virophage genome sequences 10-fold … Virus)—for the virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, …
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