Search

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In … at 18 different species, which included over 2000 RNA Seq libraries. As I previously mentioned, this is an …

… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Metagenome Stable Isotope Probing (SIP) Used for the identification of active groups of organisms within a …

The United States  is the world’s leading soybean producer , and soybeans are used to produce … Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop … JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       … The U.S. Department of Energy …

Using a novel computational approach, researchers confirm … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire genetic … that the majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences …

See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These …

… research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao Ma. …

… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … approved proposal – including the submission of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all …

… highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s … own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and …

Describing the largest analysis to date of the modified DNA base … in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes …