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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked … newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for Integrative and Collaborative Genome Science , the … JGI supports, include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the …
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Jeremy Schmutz
Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … Schmutz provides scientific project management for the reference eukaryotic genomes produced by the DOE Joint … Plants 3:17054. Schmutz, J, & McClean P et al. 2014. A reference genome for common bean and genome-wide analysis of …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
Viral Genomics Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified …
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Natural soil microbiome variation affects spring foliar phenology with consequences for plant productivity and climate‐driven range shifts
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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … the CSP, researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different microhabitats – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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Secondary Metabolites Advisory Committee
… scientific relevance and quality. The Committees do not perform management functions nor do they direct the Programs’ …
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