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Cataloging the Microbes that Manage the Health of River Systems
… United States. They also provided multiple access points to the information. The team harnessed a community-science program to collect samples from across the country to standardize … of water help regulate. However, the microbes also interact with compounds like fertilizers and microplastics that might …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander … and it has been especially called on in the move to the new building where that was really critical. It takes a really … of the vision for that building, incorporated that in the design and you oversaw the construction as well as the move …
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Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient
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Single-cell isotope tracing reveals functional guilds of bacteria associated with the diatom Phaeodactylum tricornutum
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Charting Progress toward Professional Goals
… at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of STEM … Students can apply for internships and work onsite with an experienced researcher who serves as their mentor. By contributing to projects that will help them build skills and tools, they gain invaluable scientific and …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… researchers described how the viruses repeatedly attempted to infect and destroy the host archaea – and how the  … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … to host Altiarchaea. The team then tracked how Altiarchaea build immunity to viruses. To do so, they compared samples …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's … been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few … that giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this …
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Scaling Up Existing Skill Sets
… Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … the door for me in the sense that I learned many different tools in bioinformatics research. Also, it consolidated my …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines … are developing and applying laboratory ecosystems to help transition microbiome science from largely observational to … the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible …
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Webinar: PhycoCosm Tutorial
… algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your … not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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JGI@25: The Little Alga That Could
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … manual curation of the Chlamydomonas genes. The need for streamlining those gene names speaks to the impact of this …
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