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Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of Highly Diverse Inbred Lines 2014 Plant Journal … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …

… of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … by its genomes and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  …

A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in … would best serve their quests related to processing RNA-sequencing information. According to Lawrence, this summer … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …

… scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, extracting … DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called …

… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to … under US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

In honor of the JGI's 25th anniversary in 2022, we have … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … JGI: 2009: JGI and collaborators use whole-genome shotgun sequencing to analyze the 730-megabase Sorghum bicolor (L.) …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Eloe-Fadrosh noted that it was a nice example of …