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… data set will help identify how different elements of the ecosystem interact and respond to changes in the … response to its surroundings — illuminating the molecular mechanisms for adaptation within the trees. The data set … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …

Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours …

… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass …

… and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a …

Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. …

… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so …

… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … Office of Science User Facility, and others like it, are uncovering the true diversity of the fungal kingdom. The … genomes and epigenomics, researchers are unwrapping complex mechanisms of genome-wide regulation and cataloging them in …