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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC … management. Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative where she leads infrastructure … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have … on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research … (SCGSR) program awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … and the interactions of plants with their associated microbiomes. Tringe was also Kaze’s mentor during her 2018 …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to … for research training experience. Enabled by the DOE RENEW initiative, undergraduate student Ti’Yanna Watson and … of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching workshops …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC … and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the … Human Virome Program .  Nikos Kyrpides , head of the JGI’s  Microbiome Data Science , leads one project with JGI …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: … Seattle, Washington.   Topics will include:  environmental microbiomes biodesign and synthetic biology AI/ML-enabled …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for … help cultivate new user communities. Biomolecular materials initiative. Pairing the JGI’s genomic capabilities with the …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE … the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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