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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for their “significant … influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists …
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A unified initiative to harness Earth's microbiomes
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Terabase-Scale Coassembly of a Tropical Soil Microbiome
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of Highly Diverse Inbred Lines 2014 Plant Journal … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows …
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
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Synthesis
Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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The More the Merrier: Making the Case for Plant Pan-genomes
… their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three or … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … called pectin and hemicellulose. While these two polysaccharides can yield sugar monomers, it’s only with … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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