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Generation of Transcript Assemblies and Identification of Single Nucleotide Polymorphisms from Seven Lowland and Upland Cultivars of Switchgrass
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A Single Nucleotide Change in the polC DNA Polymerase III in Clostridium thermocellum Is Sufficient To Create a Hypermutator Phenotype
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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DOE JGI Metagenome Workflow
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Terabase-scale metagenome coassembly with MetaHipMer
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, … machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS …
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A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyo n
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with previously … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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