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JGI@25: Roots of a Mutualist Relationship
… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. … of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader ecosystem …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Bacterial Microcompartments
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Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …
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NeLLi — Symposium on New Lineages of Life
Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the … capabilities. Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access … This symposium series will provide an overview of the bacterial, archaeal and microeukaryote diversity cataloged …
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Honey Bee Gut Microbiota Divvy Up Dinner
… absorbable solution of sugars. But pollen contains plant cell walls, which have complex, branching chains of … yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees rely on their gut microbiota … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
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JGI@25: From Life at the Extremes to Editing Genomes
… of miniature CRISPR-associated proteins that can target single-stranded DNA. Such proteins have been adapted for … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Building Sphagnum Genomic Resources
… and climate is estimated to be larger than any other single plant genus. Peatlands accumulate partially … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant …
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