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… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … foundation for Phytozome v10) back in 2014.  Several components of that codebase are no longer supported, and there are now much more powerful and flexible tools available for building high …

… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … by Harnessing Multiple Scientific User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged metagenomics to …

… and molecular characterization capabilities in just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … Collaborations for User Science” (FICUS) program. Letters of Intent are due March 17, 2021. Q&A from the Webinar: …

… With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic … of using phages to engineer microbial communities. One day, these phages could boost plant-microbe … This work was supported by the U.S. Department of Energy, Office of Science, Biological and Environmental …

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … process called fermentation. To better understand the range of bacteria and archaea that rely on this form of … Explorer ( GitHub ) with a series of large datasets. One test was to predict traits of more than 400 cultured …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine … development. Summary With the aim of producing at least one reference genome for every family of fungi, the 1000 …

… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … with: Until they came up with this new method, Session mentioned that the analysis for determining the evolutionary …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … as well as the Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are …

… single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract …

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … watershed scale models to manage river ecosystems. One application for the information is the development of …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down … the same on an industrial scale to produce biofuels . Since one of the challenges of developing alternative fuels from …