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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … perform functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps …
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Virus Discoveries that Keep Getting Bigger
… quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments all over … then co-culturing isolated viruses in eukaryotic  microbial hosts. Lately, researchers have used … makeup of new giant viruses. This review highlights four of these approaches. One way of detecting giant viruses …
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Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
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Constraining the oxygen requirements for modern microbial eukaryote diversity
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Informatics Advisory Committee
… management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Exploring the Diversity of the American Prairie’s Switchgrass
… a complex genome and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… to the worldwide scientific community through its  User Programs on a competitive, peer-reviewed basis. Speakers and … a keynote speaker addressed the conference, sharing the journeys of their research careers, and showcasing the broad … of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced Bruce …
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JGI-UC Merced Interns Share Their 2021 Experiences
… JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in science. To learn more about each intern’s experience during …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE …
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JGI announces final round of 2022 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … deadline is July 31. You can learn more about our Community Science Program here .  …
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Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the … recently published paper with first author Amundson in the journal Microbiome . The work builds off a proposal approved through a collaborative science initiative called Facilities Integrating …
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