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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial … is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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JGI & KBase at PAG XXVII
… representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with … and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks …
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Frederik Schulz
… user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz … samples. … B.Sc. Biochemistry, University of Applied Sciences Mannheim (Germany) M.Sc. Molecular Microbiology, … 5 (1), 1-6 Google Scholar … Senior Editor, ISME Journal LBNL LDRD (Soil Protists) FY2022 LBNL LDRD (Viral …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … regulatory networks as they responded to available carbon sources, which ranged from simple sugars to plant biomass. …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By … for User Science (FICUS) initiative and used resources at the Environmental Molecular Sciences Laboratory …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … to the public in a highly-cited 2006 publication in the journal Science . This provided a framework essential to …
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Tracking the Origins of Methane-Producing Microbes
… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the …
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JGI Hosts GPU Hackathon in May
… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …
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Gut Fungi: Unexpected Source of Novel Chemicals
… expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of … can breathe oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness … natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …
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Toward More Efficient Artificial Photosynthesis
… and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using … current natural processes and use it as a sustainable resource for making high-value bioproducts. As a step toward … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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