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First Monoploid Reference Sequence of Sugarcane
… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in developing … BioEnergy Institute, support was provided by the Office of Science of the U.S. Department of Energy under Contract No. …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … to create pipelines, tools and other standardized data resources that the global research community can access and use … Lake Mendota is told as part of a three-part series of our  Genome Insider podcast .    ( Subscribe to Genome …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms … interactions. This work,  recently published in  The ISME Journal , by contrast, relied on methods that eschew … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … many species able to occupy the regions where eelgrass flourishes. The plant can thrive in both frigid and tropical … Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly that enabled …
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Wringing everything out with bioprospecting
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The Power of One, Amplified
… single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … microbial populations. The work appeared in The ISME Journal . Members of the Dunfield lab collected samples from …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC … Mentor: Dr. Arnold Kim)   “It is a beautiful thing, that our young campus earned 25% of the research awards,” said … “This is a true testament of the hard work and caliber of our first-generation students and the amazing mentorship …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why … proposals — through the New Investigator call under our Community Science Program . Below find a list of researchers whose …
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2023 Progress Report
… Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … complex biological and environmental systems. We optimize our service to the community through responsibly managing our people and resources.   Director's Perspective   Honors …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… potential for AI-driven studies of energy metabolism. The Science Researchers produced nearly 10,000 new annotations … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Berkeley Lab, addressed this gap in … standardized structure of the dataset position it as a resource for AI-driven approaches to predicting fungal …
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Taking Stock of the Known and Unknown Microbial Space
… global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. Department of … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … representation. “When it comes to isolate genome data, our real-world touchstones, we’re just scratching the …
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