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SAR11 bacteria linked to ocean anoxia and nitrogen loss
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Diversity and biogeography of SAR11 bacteria from the Arctic Ocean
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … recalled study co-author David Lowry, who started as a postdoctoral fellow in the Juenger lab and continues to work … other southern locales did not survive the cold winter of 2019 at the most northern common garden in South Dakota. …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel … registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. …
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Extracting the Secrets of Secondary Metabolites
… in overcoming this obstacle when it hit the scene in 2019. Now, that power is poised to grow exponentially by … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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Help from Citrus’ Bitter, Hardier Cousin
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study … yet sweet are its genetic secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel …
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Micro-Scale Applications Group
… information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA … additional functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate …
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Learning to Look
… will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … viruses,” said the study’s lead author Simon Roux, a JGI research scientist in the  Environmental Genomics group …
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Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
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