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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Organic sulfur fingerprint indicates continued injection fluid signature 10 months after hydraulic fracturing
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Biogeography and organic matter removal shape long-term effects of timber harvesting on forest soil microbial communities
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Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration
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Homologous Recombination and Transposon Propagation Shape the Population Structure of an Organism from the Deep Subsurface with Minimal Metabolism
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … of analysis is the ability to see how microbial communities interact; beyond bacteria, these samples harbored fungal … and fungi identified in this study was the ability of these organisms to degrade aromatic compounds from burned …
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Microbiome Data Science Team
… learning approaches in data analysis and interpretation is creating new opportunities for … GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark matter … Schulz F, et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature …
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How Maize Makes An Antibiotic Cocktail
… are important in plant growth, defense, and environmental interactions, and also have industrial applications, … zealexin pathway genes. And they transferred genes of interest to tobacco ( Nicotiana benthamiana ), giving the … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) …
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JGI Announces 2025 New Investigator Portfolio
… environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  …
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Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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