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Homologous Recombination and Transposon Propagation Shape the Population Structure of an Organism from the Deep Subsurface with Minimal Metabolism
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … of analysis is the ability to see how microbial communities interact; beyond bacteria, these samples harbored fungal … and fungi identified in this study was the ability of these organisms to degrade aromatic compounds from burned …
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How Maize Makes An Antibiotic Cocktail
… are important in plant growth, defense, and environmental interactions, and also have industrial applications, … zealexin pathway genes. And they transferred genes of interest to tobacco ( Nicotiana benthamiana ), giving the … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) …
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JGI Announces 2025 New Investigator Portfolio
… environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  …
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Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria
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QTL × environment interactions underlie adaptive divergence in switchgrass across a large latitudinal gradient
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Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any … that most bookmarked v12 links (e.g., to gene reports and organism information pages) will be seamlessly forwarded to …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… through a process called methanogenesis. Methanogenic microorganisms therefore play a critical role in the global carbon cycle, and are of significant interest for their potential contributions to a sustainable … at once — rather than cultivating a single microorganism within a lab setting.  Roland Hatzenpichler is an associate …
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