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A survey of computational approaches for characterizing microbial interactions in microbial mats
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of firsts, including the flagship internship program between … their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more …
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Betsy Read
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Understanding Wildfire Recovery, Starting in Soil
… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By … model and track the forest recovery process.  Summary Most studies on post-wildfire soil microbiomes have focused on …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … found only in the archaeal lineage Euryarchaeota; recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research … researchers can develop high-throughput and high-resolution studies of interactions between host cells and viruses in …
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Supercharging SIP in the Fungal Hyphosphere
… The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  … prone, which limits the size and complexity of research studies that use SIP. Researchers at Lawrence Livermore …
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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Russulaceae: a new genomic dataset to study ecosystem function and evolutionary diversification of ectomycorrhizal fungi with their tree associates
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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes
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The microbial ecology of permafrost
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