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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … whose complex genomes are helping breeders understand how they can boost crop productivity and develop additional …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with … collaboration.  JGI Director Nigel Mouncey reflected on how the JGI-UC Merced Intern partnership had become a … and alumni shared their perspectives on the program and how much it meant to be a part of it all. Among them was …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. … their functional roles in their community. This study shows how the function-driven, single-cell screen can uncover more … of Energy, Office of Science, Office of Biological and Environmental Research, through contract …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … it lose less water in a hot, dry environment. Figuring out how plants evolved to deal with hot and dry conditions could … and I kicked off our conversation with a quick recap of how plants, in general, work. KAROLINA:  We all know plants …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A … The Blob, researchers developed a preliminary model of how marine microbial communities are affected by warming … studies could help researchers improve predictive models on how climate change may impact marine microbes and by …
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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Adaptations to marine versus terrestrial low temperature environments as revealed by comparative genomic analyses of the genus Psychrobacter
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … and integration with single-cell RNA sequencing reveals how transcription factors control gene expression and cell …
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … before felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a … CRISPR-Cas9 in order to interrogate each one’s function. However, the team first needed to fix a defect in the …
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JGI User Executive Committee Expands
… Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the … in understanding which processes change biodiversity, and how these changes affect the dynamics and functioning of … tools that can help with dataset analysis, as well as how they can be shared with and used by students. Solomon  …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 … glacially dominated Copper River Delta. They’re looking at how the microbes in these high latitude wetlands, such as …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … down polysaccharides. But scientists have wondered exactly how the microbial community carries out its helpful … bacterial clades can metabolize hemicellulose and pectin. However, the two specialize to an extent.  Gilliamella  …
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